PubMed Connections (real name pending…) is a project
to analyse the relationships between authors in the
PubMed database in near real-time.
Conda Environment
This project uses a conda environment to manage its
dependencies. Instructions to install conda can be
found in the
conda documentation.
1. Creating the environment
This only has to be done once. This command will
create a new conda environment that can be used
to run the website locally.
conda env create -f environment.yml
2. Activating the environment
This will activate the environment so that you
can run the website with all its dependencies
loaded.
conda activate pubmed-connections
3. Updating the environment
This will update the environment to include any
new dependencies that were added to the
environment.yml
file.
conda env update --name pubmed-connections --file environment.yml --prune